{"id":46,"date":"2008-05-21T15:53:47","date_gmt":"2008-05-21T13:53:47","guid":{"rendered":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/2008\/05\/21\/there-is-still-need-for-an-open-source-structure-editor-applet\/"},"modified":"2008-05-21T15:53:47","modified_gmt":"2008-05-21T13:53:47","slug":"there-is-still-need-for-an-open-source-structure-editor-applet","status":"publish","type":"post","link":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/2008\/05\/21\/there-is-still-need-for-an-open-source-structure-editor-applet\/","title":{"rendered":"There is still need for an open source structure editor applet &#8230;"},"content":{"rendered":"<p>&#8230; with a reasonably small footprint &#8230; and we&#8217;ll soon have one that is actually usable.<\/p>\n<p>Well, with the JChemPaint applet, as used in NMRShiftDB, we do have an open source structure drawing applet available but we (as in &#8220;the makers&#8221;) have to admit that it still has a pretty big foot print. If you look at <a href=\"http:\/\/www.nmrdb.org\/search\" target=\"_blank\">Peter Ertl&#8217;s famous editor in action<\/a> or the new <a href=\"http:\/\/metamolecular.com\/chemwriter\" target=\"_blank\">ChemWriter editor<\/a> by Rich Apodaca&#8217;s MetaMolecular, you see how fast loading improves your user experience. Our <a href=\"http:\/\/www.ebi.ac.uk\/chebi\/advancedSearchForward.do\" target=\"_blank\">ChEBI database&#8217;s new structure search <\/a>still uses a <a href=\"http:\/\/www.chemaxon.com\/\" target=\"_blank\">ChemAxon Marvin Sketch applet<\/a>, but since we promise the world a full open source version of ChEBI, we&#8217;ll be in need for a free (as in speech) replacement.<\/p>\n<p>But there is light at the end of the tunnel. Our colleague <a href=\"http:\/\/chem-bla-ics.blogspot.com\/\" target=\"_blank\">Egon Willighagen<\/a> reports on <a href=\"http:\/\/chem-bla-ics.blogspot.com\/2008\/05\/development-of-new-jchempaint.html\" target=\"_blank\">his recent progress in revamping the old JChemPaint<\/a> heritage into something beautiful and usable.<\/p>\n<p>Peter Murray-Rust <a href=\"http:\/\/wwmm.ch.cam.ac.uk\/blogs\/murrayrust\/?p=1111\" target=\"_blank\">comments on the development<\/a>.<\/p>\n<p>Egon has built on work done by <a href=\"http:\/\/progz-jchem.blogspot.com\/\" target=\"_blank\">Niels Out<\/a> in a Dutch Summer of Code project last year. Niels had produced both the beautiful Java 2D based renderer as well as a provisional controller.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>&#8230; with a reasonably small footprint &#8230; and we&#8217;ll soon have one that is actually usable. Well, with the JChemPaint applet, as used in NMRShiftDB, we do have an open source structure drawing applet available but we (as in &#8220;the makers&#8221;) have to admit that it still has a pretty big foot print. If you [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[13,23,5,24,7,27],"tags":[],"class_list":["post-46","post","type-post","status-publish","format-standard","hentry","category-blue-obelisk","category-chemistry-development-kit","category-chemoinformatics","category-databases","category-open-science","category-open-source"],"_links":{"self":[{"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/posts\/46"}],"collection":[{"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/comments?post=46"}],"version-history":[{"count":0,"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/posts\/46\/revisions"}],"wp:attachment":[{"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/media?parent=46"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/categories?post=46"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/www.steinbeck-molecular.de\/steinblog\/index.php\/wp-json\/wp\/v2\/tags?post=46"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}